Cottage Cheese Pumpkin Cheesecake Cups

Introduction
These Cottage Cheese Pumpkin Cheesecake Cups are a creamy, protein-rich twist on classic pumpkin cheesecake. Made with cottage cheese, pumpkin puree, warm pumpkin spice, and a buttery graham cracker crust, they deliver all the cozy flavors of fall in convenient individual portions.
They’re easy to prepare ahead of time, making them a great fall dessert for Thanksgiving, holiday gatherings, or whenever you’re craving pumpkin cheesecake without making a full-size cheesecake.
If you love simple homemade recipes, check out our Cottage Cheese Recipes for more easy ideas.
Table of Contents
Why You’ll Love This Recipe
- 🎃 Flavors of fall: Pumpkin puree mixed with cinnamon and spices give you the great flavor of pumpkin cheesecake.
- 🥄 Creamy and delicious: The cottage cheese gives you a filling that has texture and allows you to add protein to your dessert.
- 🍂 Perfect for fall celebrations: Individual servings to make it easy to serve them for Thanksgiving, holiday parties, and family dinners.
- ⏰ Easy to prepare in advance: You can make cups ahead of time, let them chill, and add toppings right before they are served.
- 🍰 No whole cheesecake needed: You will be able to experience pumpkin cheesecake flavor without cooking or cutting a whole cheesecake.
- ✨ Easy to change it up: Top them with whipped cream, crushed graham crackers, spices, pecans, or pumpkin seeds for a different flavor.
Ingredients: Cottage Cheese Pumpkin Cheesecake Cups.
Ingredients
You only need a handful of simple ingredients to make these creamy pumpkin cheesecake cups. The cottage cheese creates a smooth, rich filling, while pumpkin puree and warm spices give the dessert its classic fall flavor.
For the Cheesecake Cups
- 2 cups full-fat cottage cheese
- 1 cup pumpkin puree
- 2 large eggs
- 1/4 cup pure maple syrup or honey
- 1 teaspoon vanilla extract
- 1 teaspoon pumpkin pie spice
- 1 teaspoon ground cinnamon
- 2 tablespoons cornstarch
- 1/4 teaspoon salt
Optional Graham Cracker Crust
- 1 cup graham cracker crumbs
- 3 tablespoons melted butter
- 1 tablespoon brown sugar
Optional Toppings
- Whipped cream
- Cinnamon
- Crushed graham crackers
- Chopped pecans
- Caramel drizzle
- Candied pecans
- Pumpkin seeds
Ingredient Notes
Cottage cheese: Full-fat cottage cheese gives the filling a richer, creamier texture. For an extra-smooth cheesecake, blend it thoroughly before baking.
Pumpkin puree: Use plain canned pumpkin puree rather than pumpkin pie filling, which already contains added sugar and spices.
Pumpkin pie spice: This provides the classic combination of warm fall spices. You can adjust the amount slightly depending on how strongly spiced you like your dessert.
Maple syrup or honey: Either works as a natural sweetener. Maple syrup adds a subtle caramel-like flavor that pairs especially well with pumpkin.
Graham cracker crumbs: These create a simple buttery base, but the cheesecake cups can also be made without the crust if you prefer a lighter dessert
Kitchen Equipment
- Blender or food processor
- Mixing bowl
- Small glasses or oven-safe dessert cups
- Measuring cups and spoons
- Baking dish
- Spoon or spatula
Looking for more easy meal ideas? Explore our Main Dishes and Dessert Recipes for more recipes to try.
How to Make Cottage Cheese Pumpkin Cheesecake Cups

- Preheat the oven.
Heat the oven to 325°F. Line a standard 12-cup muffin pan with paper or silicone liners. - Prepare the crust (optional).
Mix the graham cracker crumbs, melted butter, and brown sugar. Press about 1 tablespoon into the bottom of each liner. - Blend the filling.
Add the cottage cheese, pumpkin puree, eggs, maple syrup, vanilla, pumpkin pie spice, cinnamon, cornstarch, and salt to a blender. Blend until completely smooth. - Fill the cups.
Divide the filling evenly among the prepared muffin cups, filling each about three-quarters full. - Bake.
Bake for 22–26 minutes, or until the centers are just set with a slight jiggle. - Cool completely.
Let the cheesecake cups cool in the pan for 20 minutes, then transfer them to a wire rack. - Chill.
Refrigerate for at least 3 hours, or overnight, for the best texture. - Decorate and serve.
Top with whipped cream, a sprinkle of cinnamon, chopped pecans, or a drizzle of caramel before serving.
Expert Tips
- Blend the cottage cheese until completely smooth for the best cheesecake texture.
- Don’t overbake. The centers should still have a slight wobble.
- Chill the cheesecake cups completely before serving.
- Use room-temperature eggs for a smoother batter.
- Silicone muffin liners make the cheesecake cups easier to remove.
- Add toppings just before serving to keep them fresh.
For more simple morning ideas, check out our [Breakfast Recipes].

Love cheesecake? Try our [Cottage Cheese Pumpkin Cheesecake Cups] for more creamy and protein-rich ideas.
Variations
Chocolate Pumpkin Cheesecake Cups
Add 2 tablespoons cocoa powder and sprinkle mini chocolate chips on top.
Maple Pecan Cheesecake Cups
Top with toasted pecans and an extra drizzle of maple syrup.
Mini Cheesecake Bites
Use a mini muffin pan and reduce the baking time to about 12–15 minutes.
Cheesecake Parfaits
Layer the filling with crushed graham crackers and whipped cream in small dessert glasses instead of baking.
Gluten-Free Version
Use gluten-free graham crackers or skip the crust entirely.
Dairy-Free Twist
Use a dairy-free cottage cheese alternative if available and substitute dairy-free whipped topping.
Serving Suggestions
These pumpkin cheesecake cups are delicious served with:
- ☕ Hot coffee
- 🍂 Chai tea
- 🍎 Warm apple cider
- 🍨 Vanilla ice cream
- 🍯 Caramel sauce
- 🥜 Toasted pecans
- 🍁 Maple whipped cream
They also make a beautiful addition to Thanksgiving, Friendsgiving, or any fall dessert table.
Storage Instructions
Store leftover cheesecake cups covered in the refrigerator. For the best texture and flavor, enjoy them within 3 to 4 days.
For general food-safety guidance on storing cooked leftovers, see the USDA’s recommendations for leftovers and food safety.
Keep the cheesecake cups refrigerated until you’re ready to serve, and avoid leaving this dairy- and egg-based dessert at room temperature for extended periods.
Frequently Asked Questions
Can I use low-fat cottage cheese?
Yes. Full-fat cottage cheese creates a richer texture, but low-fat works well too.
Can I skip the crust?
Absolutely. The cheesecake filling is delicious on its own and makes a lower-carb dessert.
Why should I blend the cottage cheese?
Blending removes the curds and creates a silky-smooth cheesecake filling.
Can I make these ahead of time?
Yes. They’re actually even better after chilling overnight, making them a perfect make-ahead dessert.
Can I use pumpkin pie filling?
No. Always use plain pumpkin puree. Pumpkin pie filling already contains added sugar and spices.
How do I know when they’re done baking?
The edges should be set, while the centers should still jiggle slightly when the pan is gently shaken.
Can I add protein powder?
Yes. A scoop of vanilla protein powder can be blended into the filling. You may need to add a tablespoon or two of milk if the mixture becomes too thick.
Are these good for meal prep?
Yes. Individual portions make them an excellent grab-and-go dessert or snack throughout the week.

Nutrition Information
Estimated per cheesecake cup (based on 12 servings):
- Calories: 145
- Protein: 10g
- Carbohydrates: 11g
- Fat: 7g
- Saturated Fat: 3g
- Fiber: 1g
- Sugar: 7g
- Sodium: 230mg
Nutrition information is an estimate and will vary depending on the ingredients and toppings used.
Final Thoughts
These Cottage Cheese Pumpkin Cheesecake Cups deliver everything you love about classic pumpkin cheesecake in a simple, individual-sized dessert. They’re creamy, lightly spiced, and naturally packed with protein thanks to blended cottage cheese.
Whether you’re serving them at a holiday gathering, enjoying one with your afternoon coffee, or prepping desserts for the week, these cheesecake cups are sure to become a favorite fall recipe.
MORE FIDA RECIPES
- Cottage Cheese Protein Ice Cream
- Cottage Cheese Parmesan Fry Sticks
- Cottage Cheese Pumpkin Cheesecake Cups
- Pumpkin Spice Baked Oatmeal
- High-Protein Cottage Cheese Recipes
Cottage Cheese Pumpkin Cheesecake Cups
These cottage cheese pumpkin cheesecake cups are creamy, high in protein, and full of warm pumpkin spice flavor. An easy no-fuss fall dessert.
- Total Time: 12–15 minutes.
- Yield: 12 1x
Ingredients
For the Cheesecake Cups
- 2 cups full-fat cottage cheese
- 1 cup pumpkin puree
- 2 large eggs
- 1/4 cup pure maple syrup or honey
- 1 teaspoon vanilla extract
- 1 teaspoon pumpkin pie spice
- 1 teaspoon ground cinnamon
- 2 tablespoons cornstarch
- 1/4 teaspoon salt
Optional Graham Cracker Crust
- 1 cup graham cracker crumbs
- 3 tablespoons melted butter
- 1 tablespoon brown sugar
Optional Toppings
- Whipped cream
- Cinnamon
- Crushed graham crackers
- Chopped pecans
- Caramel drizzle
- Candied pecans
- Pumpkin seeds
Instructions
If you love pumpkin cheesecake but want an easier, lighter version, these Cottage Cheese Pumpkin Cheesecake Cups are just what you need. They combine creamy cottage cheese, pumpkin puree, warm fall spices, and a touch of maple syrup into a smooth, rich dessert that tastes like pumpkin cheesecake in every bite.
These individual cheesecake cups are baked until perfectly set, then chilled for a cool, creamy finish. They’re great for holiday gatherings, meal prep, or whenever you’re craving a cozy pumpkin dessert without making a full cheesecake.
Notes
Cottage cheese: Full-fat cottage cheese creates the creamiest cheesecake texture. Blend it until completely smooth.
Pumpkin puree: Use pure pumpkin puree, not pumpkin pie filling.
Maple syrup: Adds natural sweetness and complements the pumpkin flavor beautifully.
Cornstarch: Helps the cheesecake cups set while keeping them creamy.
Pumpkin pie spice: Adds the classic warm flavors of cinnamon, nutmeg, ginger, and cloves.
- Category: Cottage Cheese
- Cuisine: American
Nutrition
- Calories: 145
- Fat: 7g
- Saturated Fat: 3g
- Carbohydrates: 11g
- Fiber: 1g
- Protein: 10g
Keywords: pumpkin cheesecake cups, high-protein pumpkin dessert, cottage cheese cheesecake, healthy pumpkin cheesecake, mini pumpkin cheesecakes, easy fall dessert, pumpkin protein dessert
